Open Directory - Science: Biology: Software

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Top
: Science
: Biology
: Software (30)

Biochemistry and Molecular Biology@ (19)
Bioinformatics@ (93)
Ecology@ (41)
Electrophoresis@ (11)
Evolutionary Biology@ (10)

Genetics@ (55)
Microbiology@ (3)
Statistics@ (202)
Taxonomy@ (33)

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German (3)

Amira: Visualize, Analyze, Present - Software platform for visualizing, manipulating and understanding life science and bio-medical data coming from all types of sources and modalities.
BioKM - Online laboratory management tool that allows researchers to plan, execute and monitor progress and research data.
BioVis3D: Research All Dimensions - Flexible and easy-to-use software designed for researchers to reconstruct 3D models from histological serial sections. A new feature is that single neurons can now be modeled in a 3D environment along with their interconnections.
Biosoft - Programs for data analysis, graphics and statistics.
Biospecimen Inventory System - BSI-II is customizable specimen inventory management software.
Cells&Maps - Downloadable freeware to analyse immunocytochemistry images.
DNA Dragon - Sequence assembly and editing software for DNA sequences which also processes trace data and next generation sequencing data. Trial license available.
Determix: Lysandra Online Project - Provides biological databases, bioinformatics software and interactive keys.
Dynamic Clamp - DYNCLAMP4 is a program to insert artificial synapses and conductances in up to 4 neurons in real time.
ImStar - Bio-imaging software and fully automated systems for research and clinical diagnostic with focus on genetic diseases and cancers.
Java Biology Lab - A wide variety of free online biology software programs.
Kalaimoscope Motion Tracker for Live Cell Imaging - Provides biological insights by finding, measuring and tracking image objects. High level statistical analysis tools and grid-computing capabilities are built in.
LIMS - Laboratory Information Management Systems. Compendium of information on state-of-the-art data management software.
LabLife - Lab management software for academic biology research labs. Organize data and materials, coordinate purchasing, analyze sequences and share information.
LabSys - Provides Laboratory Information Management Systems for all laboratory data management issues.
LemnaTec Image Processing in Biology - Image processing software for biotests (Lemna, Bonit, Daphnia). Distributor for various software firms.
MCID Core - Image analysis software solutions for neuroscience, biology and other life sciences.
MetaSystems - Manufacturer of automatic microscopy imaging systems for research and routine labs.
Minnesota Biomedical Business Network - MBBNet lists health-related software and information management, device, and display companies in Minnesota.
MireSoft - Provides CiteSmart, a software program to manage bibliographic references when working with PubMed. CiteClick and RefClick can cite and store references with a single click.
Nonlinear Dynamics - Product range includes analysis software for 1D and 2D electrophoresis gels, mass spectrometry and LC-MS as well as tools for multivariate statistical analysis.
RefNavigator - A software program to search biology references from Pubmed and other online libraries. It also downloads full text and makes bibliographies in Word.
Ruro, Inc - Development and production of computer software for research, biotechnological, pharmaceutical, healthcare and government laboratories. Range includes FreezerPro, ezColony, LIMS 247, and ElegantDS tools.
Serf Software Suite: Electrophy - A freeware program to analyse electrophysiological data.
SimBiotic Software - Provides a range of interactive software for biology education including virtual labs which simulate real life experiments.
Spellex Development - Biotechnology spell checking software for spelling words in the bioscience field including molecular biology, biomedicine, biophysics, microbiology, genetics and biochemistry
Stat-Ease, Inc. - Statistical software, training, and consulting on Design of Experiments for scientists and engineers.
Statistical Computation Website - Online software for calculating probability, linear correlation and regression, chi-square, t-procedures and ANOVA from Vassar College.
The Frangakis Group - Provides an electron tomography toolbox for Amira. The EMPackage is a powerful toolbox for three-dimensional electron microscopy in Amira.
eBioSys - Provides eLab, an easy-to-use laboratory information management system that improves sample throughput and reduces IT costs. Also offers IT consulting services for the biological sciences.

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Last update: Tuesday, October 5, 2010 6:37:26 PM EDT - edit

Description

Open Directory - Science: Biology: Biochemistry and Molecular Biology: Software

See also:

Business: Electronics and Electrical: Instrumentation: Data Acquisition and Control: Software (56)
Science: Biology: Bioinformatics: Software (93)
Science: Biology: Software (30)
Science: Chemistry: Software (203)

Argo - Software developed by the Broad Institute for visualizing and manually annotating whole genomes. Free for research and educational users
BioKin, Ltd. - Offers script-driven programming for data analysis in viral dynamics, enzyme kinetics, receptor binding and drug discovery screening. Includes demo download, technical support and contacts for consulting in Pullman, Washington.
Bioinformatics Software - Provides details of a number of molecular biology tools, some of which are freeware.
Blue Tractor Software - Java based commercial software for DNA and Protein sequence analysis. Demo available.
DNA Sequencing Software - software to improve the quality of DNA sequencing traces collected on the ABI 3700 and 3730 DNA sequencers.
DoMix Scientific Software - Offers software for sequence alignment, phylogenetic tree visualization, contig assembly and sequence proof reading
EnzymeX - Free MacOS X program for molecular biologists that can be used to determine which restriction enzymes cut a DNA sequence. Includes list of all commercially available RE.
FinchTV - Free DNA sequencing chromatogram trace viewer. Runs on Window, MacOS X, Linux and Solaris. Uses QT library.
GenoLogics - Develops data management software solutions for life sciences research. Products include tools for genomics, proteomics, biorepositories, multiple laboratories, systems biology and translational research.
Insilico Biotechnology - Offering predictive software tools and services for metabolic engineering and drug discovery. Based in Germany.
JaMBW - Java based biologist's workbench by Luca I.G.Toldo.
Ludesi - Analysis software and service for 2D electrophoresis gels as tools for multivariate statistical analysis.
MacVector - Macintosh software which provide sequence editing, primer design, database searching, protein analysis, alignment, phylogeny, and other functions.
Mekentosj software - Free MacOS X programs for molecular biologists. Offers 4Peaks - a DNA sequencing trace viewer, iRNAi - RNAi design, and LabAssistant - lab timer/organizer.
Molecular Biology Software Links - Links to biological software for DNA sequencing, molecule modeling, polymerase chain reaction and taxonomy.
PeakTrace Basecaller - A new base caller for ABI DNA sequencers including the 377, 3700, 310, 3100, 3130 and 3730 models. Provides increases in read length of 20 to 100%.
Phenosystems - Offers the Gensearch software to locate and analyse potential mutation locations.
SoftZymics - Package for statistical analysis of steady-state enzyme kinetic data, and presentation graphics, for Macintosh or Windows based computers. Previews, price and form to order from Princeton, New Jersey.
StarBiochem - StarBiochem is an application that displays molecules from the Protein Data Bank. It allows users to explore fundamental biological research concepts, select parts of the molecule and control how the selected parts are displayed.

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Last update: Monday, August 9, 2010 8:34:29 AM EDT - edit

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